The detailed information of tRNA gene sequence


Sequence ID>A171002718
Genome IDCP003050
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalovivax ruber XH-70 [CP003050]
Start position on genome 2208528
End posion on genome 2208446
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
gggatgttgc
tRNA gene sequence 
GCGCGGGTAGCCAAGTGGCCAATGGCGCAGCGCTTAGGACGCTGTGGTGTAGACCTCCGC
AGGTTCGAATCCTGTCCCGCGCAtac
Downstream region at tRNA end position 
cgccgcgaac
Secondary structure (Cloverleaf model)
>A171002718	Leu	TAG
                   c      Atac cgccgcgaac
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     G
    G       A C C G       G C A G G     C
    G       | | | |                 T T
    C       T G G C
      C A A        G     TGGTGTAGACCTCC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.-

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