The detailed information of tRNA gene sequence


Sequence ID>A171002790
Genome IDCP003117
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothrix harundinacea 6Ac [CP003117]
Start position on genome 552953
End posion on genome 553038
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttggggtcgg
tRNA gene sequence 
GTCGAGGTAGCCAAGCCTGGTATGGCGCAGGTTTGCTAAACCTGTGTCCCTTCGGGACTC
GAGGGTTCGAATCCCTCCCTCGGCGCta
Downstream region at tRNA end position 
attttataaa
Secondary structure (Cloverleaf model)
>A171002790	Ser	GCT
                   g      GCta attttataaa
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     G
    C       A C C G       G A G G G     C
    T       | | | |                 T T
    G       T G G C
      G T A        G     TGTCCCTTCGGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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