The detailed information of tRNA gene sequence


Sequence ID>A171002794
Genome IDCP003117
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothrix harundinacea 6Ac [CP003117]
Start position on genome 1144178
End posion on genome 1144249
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cccgcccagc
tRNA gene sequence 
GGGCCGGTAGATCAGGGGTAGATCGCTACCTTGGCATGGTAGAGGCCTCGGGTTCAAATC
CCGACCGGTCCAtag
Downstream region at tRNA end position 
gggcttatcg
Secondary structure (Cloverleaf model)
>A171002794	Ala	GGC
                   c      Atag gggcttatcg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     A G C C C     A
        G A        A      | | | | |     A
      G     C T A G       T C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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