The detailed information of tRNA gene sequence


Sequence ID>A171002802
Genome IDCP003117
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothrix harundinacea 6Ac [CP003117]
Start position on genome 2511020
End posion on genome 2511093
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gggagattga
tRNA gene sequence 
GGGCCCGTGGTCTAGGTGGTTATGACATCGCCTTCACACGGCGGGGATCACGCGTTCGAA
TCGCGTCGGGCCCAtca
Downstream region at tRNA end position 
actcttctgg
Secondary structure (Cloverleaf model)
>A171002802	Val	CAC
                   a      Atca actcttctgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C G C     A
      G G A        G      | | | | |     G
    T       T C T G       A C G C G     C
    G         | | |                 T T
    G       T G A C
      T T A        A     GGATC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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