The detailed information of tRNA gene sequence


Sequence ID>A171002820
Genome IDCP003167
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanoregula formicica SMSP [CP003167]
Start position on genome 273216
End posion on genome 273298
Amino Acid Pseudo
Anticodon CAA
Upstream region at tRNA start position 
actattctgc
tRNA gene sequence 
GCGAGAATATCTAAGTGGCCAACAGAGGCAGACTCAAGATCTGTTCCCGAAGGGGTTCGC
AGGTTCAACTCCTGCTTCTCGCAtct
Downstream region at tRNA end position 
tttctgaacg
Secondary structure (Cloverleaf model)
>A171002820	Pseudo	CAA
                   c      Atct tttctgaacg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T          T C
                    T     C G T C C     A
      T G A        A      | | | | |     A
    G       A T C T       G C A G G     C
    G         | | |                 T T
    C       C A G A
      C A A        G     TCCCGAAGGGGTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.-

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