The detailed information of tRNA gene sequence


Sequence ID>A171002841
Genome IDCP003167
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanoregula formicica SMSP [CP003167]
Start position on genome 2604157
End posion on genome 2604241
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tacacttttt
tRNA gene sequence 
GCTGAGGTAGTCTAGCGGTAGGGCGCAGGCCTGGAAAGCCTGTGGTGCGAAAGTGCCTCG
GGGGTTCAATTCCCCCCCTCAGCGCtt
Downstream region at tRNA end position 
ctttcatttt
Secondary structure (Cloverleaf model)
>A171002841	Ser	GGA
                   t      GCtt ctttcatttt
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T T
                    T     C C C C C     A
        G A        A      | | | | |     A
      C     T C T G       G G G G G     C
      G     + | + |                 T T
      G     G G G C
        T A        G     TGGTGCGAAAGTGCCTC
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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