The detailed information of tRNA gene sequence


Sequence ID>A171002846
Genome IDCP003167
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanoregula formicica SMSP [CP003167]
Start position on genome 2621920
End posion on genome 2621845
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggggcgcttg
tRNA gene sequence 
GGGCCCGTAGCTCAGTCCGGTTAGAGCGCCCGGCTCATAACCGGGCGGTCATGGGTTCGA
ATCCCTTCGGGCCCACtg
Downstream region at tRNA end position 
cccggttttt
Secondary structure (Cloverleaf model)
>A171002846	Met	CAT
                   g      ACtg cccggttttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    C T G A        A      |   | | |     G
  C         C T C G       A T G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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