The detailed information of tRNA gene sequence


Sequence ID>A171003127
Genome IDCP003378
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldisphaera lagunensis DSM 15908 [CP003378]
Start position on genome 566017
End posion on genome 566088
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tattttatga
tRNA gene sequence 
GGGCCGGTAGTTCAGTGGAAGAATGCCGCCCTCGCACGGCGGAGGTCCCGGGTTCAAATC
CCGGCCGGTCCAtat
Downstream region at tRNA end position 
ttctatatta
Secondary structure (Cloverleaf model)
>A171003127	Ala	CGC
                   a      Atat ttctatatta
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
        G A        A      | | | | |     A
      T     C T T G       C C G G G     C
      G     | | | +                 T T
      G     G A A T
        A A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.-

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