The detailed information of tRNA gene sequence


Sequence ID>A171003140
Genome IDCP003378
Search identical group
Phylum/ClassThermoproteota
SpeciesCaldisphaera lagunensis DSM 15908 [CP003378]
Start position on genome 1180627
End posion on genome 1180553
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
attataaatg
tRNA gene sequence 
GGGCCCGTAGTCTAGGTGGTTAGGACGCCGCCCTCACACGGCGGAGGTCGCCGGTTCGAG
TCCGGCCGGGCCCACta
Downstream region at tRNA end position 
tgctataggt
Secondary structure (Cloverleaf model)
>A171003140	Val	CAC
                   g      ACta tgctataggt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G G C C     A
      G G A        A      | | | | |     G
    T       T C T G       G C C G G     C
    G       + | | |                 T T
    G       G G A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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