The detailed information of tRNA gene sequence


Sequence ID>A171003213
Genome IDCP003423
Search identical group
Phylum/ClassThermoproteota
SpeciesFervidicoccus fontis Kam940 [CP003423]
Start position on genome 656706
End posion on genome 656632
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aatcttgtag
tRNA gene sequence 
GGGCCCGTCGTCTAGCTGGTTAGGACGCCGCCCTGACGCGGCGGAGGTCCTGGGTTCGAC
TCCCAGCGGGCCCACtt
Downstream region at tRNA end position 
ctcctctata
Secondary structure (Cloverleaf model)
>A171003213	Val	GAC
                   g      ACtt ctcctctata
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     G A C C C     A
      C G A        C      | | | | |     G
    T       T C T G       C T G G G     C
    G       + | | |                 T T
    G       G G A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.-

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