The detailed information of tRNA gene sequence


Sequence ID>A171003259
Genome IDCP003534
Search identical group
Phylum/ClassEuryarchaeota
SpeciesPyrococcus sp. ST04 [CP003534]
Start position on genome 391668
End posion on genome 391744
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ccccgagtgt
tRNA gene sequence 
GGGCCCGTAGCCTAGCAGGATAGGGCGCCGGCCTTCTAAGCCGGAGGTCGCGGGTTCGAA
TCCCGCCGGGCCCGCCA
Downstream region at tRNA end position 
ttcttctaat
Secondary structure (Cloverleaf model)
>A171003259	Arg	TCT
                   t      GCCA ttcttctaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | | | |     G
    A       T C C G       G C G G G     C
    G       + | | |                 T T
    G       G G G C
      A T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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