The detailed information of tRNA gene sequence


Sequence ID>A171003297
Genome IDCP003534
Search identical group
Phylum/ClassEuryarchaeota
SpeciesPyrococcus sp. ST04 [CP003534]
Start position on genome 52457
End posion on genome 52380
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
agccttccgg
tRNA gene sequence 
GGGCCCGTGGCCTAGCCTGGAGAGGGCGCCGGCCTTCGGAGCCGGTAGTCCCGGGTTCAA
ATCCCGGCGGGCCCGCCA
Downstream region at tRNA end position 
tatgaaaagc
Secondary structure (Cloverleaf model)
>A171003297	Arg	TCG
                   g      GCCA tatgaaaagc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        G      | | | | |     A
  T         T C C G       C C G G G     C
  G         + | | |                 T T
  G         G G G C
    A G A          G     TAGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.-

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