The detailed information of tRNA gene sequence


Sequence ID>A171003299
Genome IDCP003651
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus cleftensis CL1 [CP003651]
Start position on genome 264095
End posion on genome 264180
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caaagaccgc
tRNA gene sequence 
GCCGGGGTAGCCTAGCCTGGGAAGGCGCGGGACTCGAGATCCCGTGCGCTCTGCGCACCA
GGGTTCAAATCCCTGCCCCGGCGCCA
Downstream region at tRNA end position 
ttcaaactgc
Secondary structure (Cloverleaf model)
>A171003299	Ser	CGA
                   c      GCCA ttcaaactgc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G T C C C     A
      C G A        A      | | | | |     A
    C       T C C G       C A G G G     C
    T       | | | |                 T T
    G       A G G C
      G G A        G     TGCGCTCTGCGCAC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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