The detailed information of tRNA gene sequence


Sequence ID>A171003419
Genome IDCP003843
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus sediminis AR2 [CP003843]
Start position on genome 1104818
End posion on genome 1104891
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tttacttcgt
tRNA gene sequence 
GCCAATGTAGCTCAGCCTGGTAGAGCAATTGATTTGTAATCAATAGGTCATGGGTTCAGA
TCCCGTCATTGGCTttt
Downstream region at tRNA end position 
aaatttctaa
Secondary structure (Cloverleaf model)
>A171003419	Thr	TGT
                   t      Tttt aaatttctaa
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     T - A
                     G - C          T A
                    T     T G C C C     G
      C G A        A      | + | | |     A
    C       C T C G       A T G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     AGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.-

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