The detailed information of tRNA gene sequence


Sequence ID>A171003535
Genome IDCP004049
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanomethylophilus alvi Mx1201 [CP004049]
Start position on genome 1446738
End posion on genome 1446663
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cctattaagt
tRNA gene sequence 
GGGCCCTTGGGGTAGCTTGGTATCCTTCATGCTTGGGGTGCATGTGACCCCGGTTCAAAT
CCGAGGGGGCCCACCA
Downstream region at tRNA end position 
acttatcatc
Secondary structure (Cloverleaf model)
>A171003535	Pro	GGG
                   t      ACCA acttatcatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G          T A
                    T     G A G C C     A
      C G A        G      |   | | |     A
    T       T G G G       C C C G G     C
    T         | | +                 T T
    G       T C C T
      G T A        T     TGAC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.-

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