The detailed information of tRNA gene sequence


Sequence ID>A171003688
Genome IDCP005934
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanomassiliicoccus intestinalis Issoire-Mx1 [CP005934]
Start position on genome 146678
End posion on genome 146752
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
acaggaagtt
tRNA gene sequence 
GCCCGAGTGGGGTAGCTTGGATATCCTAAGAGATTGCGGATCTTTAGACCCGGGTTCGAA
TCCCGGCTCGGGCGCat
Downstream region at tRNA end position 
ctctcattct
Secondary structure (Cloverleaf model)
>A171003688	Arg	GCG
                   t      GCat ctctcattct
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     G
    T       T G G G       C C G G G     C
    T       | + | |                 T T
    G       A T C C
      G A T        T     TAGAC
                    A - T
                    A - T
                    G - C
                    A - T
                    G   A
                  A       G
                  T       G
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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