The detailed information of tRNA gene sequence


Sequence ID>A171003689
Genome IDCP005934
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanomassiliicoccus intestinalis Issoire-Mx1 [CP005934]
Start position on genome 161798
End posion on genome 161873
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
tgctattttt
tRNA gene sequence 
GGGCATGTAGGGTAGTCTGGATCATCCTTCCGGCCTTCGAAGCCGGTGACCCGGGTTCGA
ATCCCGGCATGCCCGCta
Downstream region at tRNA end position 
attttatcgt
Secondary structure (Cloverleaf model)
>A171003689	Arg	TCG
                   t      GCta attttatcgt
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     T - A
                     G - C          T A
                    T     G G C C C     A
    C T G A        A      | | | | |     G
  T         T G G G       C C G G G     C
  G           | | +                 T T
  G         T C C T
    A T C A        T     TGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.-

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