The detailed information of tRNA gene sequence


Sequence ID>A171004036
Genome IDCP006965
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus paralvinellae ES1 [CP006965]
Start position on genome 327566
End posion on genome 327643
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ccgggtttga
tRNA gene sequence 
GGACCGGTAGCCTAGCCAGGATAGGGCGGCGGCCTCCTAAGCCGCAGGTCCGGGGTTCGA
ATCCCCGCCGGTCCGCCA
Downstream region at tRNA end position 
gagactggat
Secondary structure (Cloverleaf model)
>A171004036	Arg	CCT
                   a      GCCA gagactggat
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G C C C C     A
    C C G A        A      | | | | |     G
  A         T C C G       C G G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.-

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