The detailed information of tRNA gene sequence


Sequence ID>A171004061
Genome IDCP006965
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus paralvinellae ES1 [CP006965]
Start position on genome 785938
End posion on genome 785862
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
tttcttgagt
tRNA gene sequence 
GCCGGGGTAGCCTAGCTCGGTAGGGCGGGGGACTCGTAATCCCCAGGTCCCGGGTTCAAA
TCCCGGTCCCGGCTCCA
Downstream region at tRNA end position 
ttacaaactt
Secondary structure (Cloverleaf model)
>A171004061	Thr	CGT
                   t      TCCA ttacaaactt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    T       T C C G       C C G G G     C
    C       + | | |                 T T
    G       G G G C
      G T A        G     AGGTC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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