The detailed information of tRNA gene sequence


Sequence ID>A171004116
Genome IDCP007026
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopelagicus brevis CN25 [CP007026]
Start position on genome 350471
End posion on genome 350394
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tgtcaaaaca
tRNA gene sequence 
GCTCCTATAGTGTAGTCCGGCCAAGCATATTGCCCTCTCAAGGCAGTGACTCGGGTTCAA
ATCCCGATGGGAGCACCA
Downstream region at tRNA end position 
ttataacaag
Secondary structure (Cloverleaf model)
>A171004116	Glu	CTC
                   a      ACCA ttataacaag
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     A G C C C     A
    C T G A        A      | | | | |     A
  C         T G T G       T C G G G     C
  G         + | | +                 T T
  G         G C A T
    C C A A        A     TGAC
                    T + G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.-

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