The detailed information of tRNA gene sequence


Sequence ID>A171004141
Genome IDCP007055
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalostagnicola larsenii XH-48 [CP007055]
Start position on genome 1743531
End posion on genome 1743616
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tacgagtcga
tRNA gene sequence 
GCCGAGATAGCCTAGCCCGGCCAAGGCGGTAGATTCGAAATCTACTGTCCCCACGGACAC
GGGAGTTCAAATCTCCCTCTCGGCGCtt
Downstream region at tRNA end position 
ttcacgacga
Secondary structure (Cloverleaf model)
>A171004141	Ser	CGA
                   a      GCtt ttcacgacga
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C T C     A
    C C G A        A      | | | | |     A
  C         T C C G       G G G A G     C
  G         | | | |                 T T
  G         A G G C
    C C A          G     TGTCCCCACGGACAC
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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