The detailed information of tRNA gene sequence


Sequence ID>A171004201
Genome IDCP007060
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalobacterium sp. DL1 [CP007060]
Start position on genome 47194
End posion on genome 47119
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ccaacgccga
tRNA gene sequence 
GGGCACGTAGCTCAGTTCGGACAGAGCGTCTGGCTTCTAACCAGACGGCCGGGGGTTCGA
ATCCCCTCGTGCCCGCtt
Downstream region at tRNA end position 
ctgcgacgag
Secondary structure (Cloverleaf model)
>A171004201	Arg	TCT
                   a      GCtt ctgcgacgag
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C          T A
                    T     T C C C C     A
    T T G A        A      + | | | |     G
  C         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    A C A          G     CGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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