The detailed information of tRNA gene sequence


Sequence ID>A171004235
Genome IDCP007140
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus guaymasensis DSM 11113 [CP007140]
Start position on genome 501044
End posion on genome 500958
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
ccgcgtgtac
tRNA gene sequence
GCCGGGATTGCCTAGCCTGGGAAGGCGCGGGCCTTGAGAGCCCGTGGGCGTTTGCCCGCC
GGGGTTCAAATCCCCGTCCCGGCGCCA
Downstream region at tRNA end position
aaatcccttt
Secondary structure (Cloverleaf model)
>A171004235	Ser	TGA
                   c      GCCA aaatcccttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G C C C C     A
      C G A        T      | | | | |     A
    C       T C C G       C G G G G     C
    T       | | | |                 T T
    G       A G G C
      G G A        G     TGGGCGTTTGCCCGC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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