The detailed information of tRNA gene sequence


Sequence ID>A171004397
Genome IDCP008874
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalanaeroarchaeum sulfurireducens HSR2 [CP008874]
Start position on genome 1232577
End posion on genome 1232652
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gcagacgagg
tRNA gene sequence 
GCTCCGATAGTGTAGTCCGGCCAATCATATTGCCCTCTCGAGGCAATGACCAGGGTTCAA
ATCCCTGTCGGAGCACtg
Downstream region at tRNA end position 
caacgagggg
Secondary structure (Cloverleaf model)
>A171004397	Glu	CTC
                   g      ACtg caacgagggg
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     G T C C C     A
    C T G A        A      | | | | |     A
  C         T G T G       C A G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        A     TGAC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.-

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