The detailed information of tRNA gene sequence


Sequence ID>A171004409
Genome IDCP008874
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalanaeroarchaeum sulfurireducens HSR2 [CP008874]
Start position on genome 1845950
End posion on genome 1845877
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgatacgttc
tRNA gene sequence 
GGGCCAGTAGCTCAATCAGGTAGAGCGCCACTCTGATAAGGTGGAAGCTTGCGGTTCAAA
TCCGCACTGGCCCAttt
Downstream region at tRNA end position 
tctctttcca
Secondary structure (Cloverleaf model)
>A171004409	Ile	GAT
                   c      Attt tctctttcca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     A C G C C     A
      T A A        A      | | | | |     A
    C       C T C G       T G C G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     AAGCT
                    C - G
                    C - G
                    A - T
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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