The detailed information of tRNA gene sequence


Sequence ID>A171004475
Genome IDCP009149
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus bathoardescens JH146 [CP009149]
Start position on genome 1063899
End posion on genome 1063975
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
atgctaaggt
tRNA gene sequence 
GCCTCGGTAGCTCAGCCTGGCGGAGCGCCTGCTTGGTAAGCAGGAGGTCGCGGGTTCAAA
CCCCGCCCGAGGCTCCA
Downstream region at tRNA end position 
ttttttattt
Secondary structure (Cloverleaf model)
>A171004475	Thr	GGT
                   t      TCCA ttttttattt
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          C A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G C G        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.-

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