The detailed information of tRNA gene sequence


Sequence ID>A171004480
Genome IDCP009149
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus bathoardescens JH146 [CP009149]
Start position on genome 1531216
End posion on genome 1531292
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gctattttgt
tRNA gene sequence 
GGGCTGGTAGCTCAGACTGGGAGAGCGCCGCATTGGCTGTGCGGAGGCCGCGGGTTCAAA
TCCCGCCCAGTCCACCA
Downstream region at tRNA end position 
tttttctaac
Secondary structure (Cloverleaf model)
>A171004480	Ala	GGC
                   t      ACCA tttttctaac
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     C G C C C     A
      A G A        A      | | | | |     A
    C       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  T       G
                  T       T
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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