The detailed information of tRNA gene sequence


Sequence ID>A171004483
Genome IDCP009149
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus bathoardescens JH146 [CP009149]
Start position on genome 1571276
End posion on genome 1571200
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ccaaaattat
tRNA gene sequence 
GGGGCCGTGGGGTAGCCTGGACATCCTGTGCGCTTGGGGGGCGTGCGACCCGGGTTCAAG
TCCCGGCGGCCCCACCA
Downstream region at tRNA end position 
tttaattttt
Secondary structure (Cloverleaf model)
>A171004483	Pro	GGG
                   t      ACCA tttaattttt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G G C C C     A
      C G A        G      | | | | |     A
    C       T G G G       C C G G G     C
    T       | + | |                 T T
    G       A T C C
      G A C        T     GCGAC
                    G + T
                    T + G
                    G - C
                    C - G
                    G   G
                  C       G
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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