The detailed information of tRNA gene sequence


Sequence ID>A171004720
Genome IDCP009505
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina sp. MTP4 [CP009505]
Start position on genome 362248
End posion on genome 362323
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aaagcaaagt
tRNA gene sequence 
GGGCTCGTGGCTTAGCCAGGATATAGCGTCGGGCTTCTAACCCGAATGTCAGGGGTTCGA
ATCCTCTCGGGCCCGCtt
Downstream region at tRNA end position 
attttttcat
Secondary structure (Cloverleaf model)
>A171004720	Arg	TCT
                   t      GCtt attttttcat
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C C G A        G      | | + | |     G
  A         T T C G       A G G G G     C
  G           | | |                 T T
  G         T A G C
    A T A          G     ATGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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