The detailed information of tRNA gene sequence


Sequence ID>A171004743
Genome IDCP009505
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina sp. MTP4 [CP009505]
Start position on genome 3207875
End posion on genome 3207792
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgaggcatgt
tRNA gene sequence 
GCCGAGGTAGTCTAGTGGTAGGGCGCAAGCCTGGAAAGCTTGTGGGGCTTAGCCCCTCGG
GAGTTCAAATCTCCCCCTCGGCGCtt
Downstream region at tRNA end position 
acattttttt
Secondary structure (Cloverleaf model)
>A171004743	Ser	GGA
                   t      GCtt acattttttt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
        G A        A      | | | | |     A
      T     T C T G       G G G A G     C
      G     + | + |                 T T
      G     G G G C
        T A        G     TGGGGCTTAGCCCCTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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