The detailed information of tRNA gene sequence


Sequence ID>A171005239
Genome IDCP009516
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina horonobensis HB-1 = JCM 15518 [CP009516]
Start position on genome 51362
End posion on genome 51433
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gatcaaaaat
tRNA gene sequence 
GCCAAGATGGCGGAGCGGCTACGCAATCGCCTGCAGAGCGATACCATTCCGGTTCGAATC
CGGATCTTGGCTttc
Downstream region at tRNA end position 
tcttctaata
Secondary structure (Cloverleaf model)
>A171005239	Cys	GCA
                   t      Tttc tcttctaata
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     A G G C C     A
        G A        G      | | | | |     G
      C     G G C G       T C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        A     ACCAT
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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