The detailed information of tRNA gene sequence


Sequence ID>A171005282
Genome IDCP009516
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina horonobensis HB-1 = JCM 15518 [CP009516]
Start position on genome 1321463
End posion on genome 1321390
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aacataacaT
tRNA gene sequence 
GGGCCGGTAGATCAGGGGAAGATCGCTACCTTGGCATGGTAGAGGCCTCGGGTTCAATTC
CCGACCGGTCCATtt
Downstream region at tRNA end position 
aaagtaatta
Secondary structure (Cloverleaf model)
>A171005282	Ala	GGC
                   T      ATtt aaagtaatta
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T T
                    T     A G C C C     A
        G A        A      | | | | |     A
      G     C T A G       T C G G G     C
      G     | | | |                 T T
      G     G A T C
        A A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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