The detailed information of tRNA gene sequence


Sequence ID>A171005360
Genome IDCP009518
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanococcoides methylutens MM1 [CP009518]
Start position on genome 588564
End posion on genome 588638
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctttttttga
tRNA gene sequence 
GGGCCTATAGCTTAGTCAGGTTAGAGCGCCCGGCTCATAACCGGGCGATCACCGGTTCAA
ATCCGGTTAGGCCCAtct
Downstream region at tRNA end position 
caacttattc
Secondary structure (Cloverleaf model)
>A171005360	Met	CAT
                   a      Atct caacttattc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     T G G C C     A
    C T G A        A      | | | | |     A
  A         T T C G       A C C G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     CGATC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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