The detailed information of tRNA gene sequence


Sequence ID>A171005401
Genome IDCP009520
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina vacuolata Z-761 [CP009520]
Start position on genome 1785444
End posion on genome 1785514
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gaatagtggt
tRNA gene sequence 
GCCAGAGTGGCGGAAAGGCTACGCAGTGGACTGCAGATCCATTTATCCCGGTTCGATTCC
AGGCTCTGGCTtaa
Downstream region at tRNA end position 
aagttttctt
Secondary structure (Cloverleaf model)
>A171005401	Cys	GCA
                   t      Ttaa aagttttctt
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C          T T
                    T     G G A C C     A
        A A        G      | |   | |     G
      A     G G C G       C C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        A     TTAT
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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