The detailed information of tRNA gene sequence


Sequence ID>A171005413
Genome IDCP009520
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina vacuolata Z-761 [CP009520]
Start position on genome 3599469
End posion on genome 3599542
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
agcctgataT
tRNA gene sequence 
GGGCCGGTAGATCAGGGGAAGATCGCTACCTTGGCATGGTAGAGGCCTCGGGTTCAATTC
CCGACCGGTCCATtt
Downstream region at tRNA end position 
aataactttt
Secondary structure (Cloverleaf model)
>A171005413	Ala	GGC
                   T      ATtt aataactttt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T T
                    T     A G C C C     A
        G A        A      | | | | |     A
      G     C T A G       T C G G G     C
      G     | | | |                 T T
      G     G A T C
        A A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.-

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