The detailed information of tRNA gene sequence


Sequence ID>A171005455
Genome IDCP009524
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina sp. Kolksee [CP009524]
Start position on genome 1737103
End posion on genome 1737173
Amino Acid Pseudo
Anticodon GCA
Upstream region at tRNA start position 
gaaaagaaat
tRNA gene sequence 
GCTGAGATGGCAGAAAGGCTACGCAGTGGATTGCAGATCCATTTATCCCGGTTCGAGTCC
GGGTCTTAGCTtag
Downstream region at tRNA end position 
agattcttct
Secondary structure (Cloverleaf model)
>A171005455	Pseudo	GCA
                   t      Ttag agattcttct
                     G - C
                     C - G
                     T - A
                     G + T
                     A - T
                     G - C
                     A - T          T G
                    T     G G G C C     A
        A A        G      | | | | |     G
      A     G A C G       C C C G G     C
      G         | |                 T T
      G     A C G C
        C T        A     TTAT
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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