The detailed information of tRNA gene sequence


Sequence ID>A171005459
Genome IDCP009524
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina sp. Kolksee [CP009524]
Start position on genome 1794240
End posion on genome 1794313
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ctcctttctT
tRNA gene sequence 
GGGCTCGTAGATCAGGGGAAGATCGTTACGTTCGCAACGTAAAGGCCGCGGGTTCGAATC
CCGCCGAGTCCATtt
Downstream region at tRNA end position 
aataacctaa
Secondary structure (Cloverleaf model)
>A171005459	Ala	CGC
                   T      ATtt aataacctaa
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G C C C     A
        G A        A      | | | | |     G
      G     C T A G       G C G G G     C
      G     | | | |                 T T
      G     G A T C
        A A        G     AGGCC
                    T - A
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.-

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