The detailed information of tRNA gene sequence


Sequence ID>A171005561
Genome IDCP009528
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina barkeri MS [CP009528]
Start position on genome 610941
End posion on genome 611012
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ctatgcattt
tRNA gene sequence 
GCCGTCGTGGCTTAGCGGTATAGCGGCTGATTCGTAATCAGCAGGTCGAGGGTTCAAGTC
CCCCCGGCGGCTttt
Downstream region at tRNA end position 
tgttttttgg
Secondary structure (Cloverleaf model)
>A171005561	Thr	CGT
                   t      Tttt tgttttttgg
                     G - C
                     C - G
                     C - G
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     C C C C C     A
        G A        G      |   | | |     A
      C     T T C G       G A G G G     C
      G       | | |                 T T
      G     T A G C
        T A        G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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