The detailed information of tRNA gene sequence


Sequence ID>A171005717
Genome IDCP010070
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanoplasma termitum MpT1 [CP010070]
Start position on genome 316042
End posion on genome 316115
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccatcgaaaa
tRNA gene sequence 
GGGCCCGTGGGGTAGCTTGGTATCCTTGTAGCTTCGGGAGCTATTGACTCCGGTTCAAAT
CCGGGCGGGCCCACtc
Downstream region at tRNA end position 
actgtacgat
Secondary structure (Cloverleaf model)
>A171005717	Pro	CGG
                   a      ACtc actgtacgat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G G C C     A
      C G A        G      + | | | |     A
    T       T G G G       T C C G G     C
    T         | | +                 T T
    G       T C C T
      G T A        T     TGAC
                    G + T
                    T - A
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.-

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