The detailed information of tRNA gene sequence


Sequence ID>A171005720
Genome IDCP010070
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanoplasma termitum MpT1 [CP010070]
Start position on genome 489425
End posion on genome 489512
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
catgaattaa
tRNA gene sequence 
GCGGAGGTAGCTAAGCCCGGCCCACGGCGCCGGTCTTGAAAACCGGTGGTGTCTCACCCC
GGGAGTTCAAATCTCCCCCTCCGCGCCA
Downstream region at tRNA end position 
cttttaccta
Secondary structure (Cloverleaf model)
>A171005720	Ser	TGA
                   a      GCCA cttttaccta
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
    C C G A        A      | | | | |     A
  C         A T C G       G G G A G     C
  G           + | |                 T T
  G         C G G C
    C C C A        G     TGGTGTCTCACCCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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