The detailed information of tRNA gene sequence


Sequence ID>A171005739
Genome IDCP010070
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Methanoplasma termitum MpT1 [CP010070]
Start position on genome 1418698
End posion on genome 1418623
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tccttttaag
tRNA gene sequence 
GGGCTCATAGCTTAGACAGGTAGAGCGCTCGGCTCATAACCGAGTGGTCGCCGGTTCAAA
TCCGGCTGGGCCCACCt
Downstream region at tRNA end position 
aatcttcctg
Secondary structure (Cloverleaf model)
>A171005739	Met	CAT
                   g      ACCt aatcttcctg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     A - T          T A
                    T     C G G C C     A
      A G A        A      | | | | |     A
    C       T T C G       G C C G G     C
    A       + | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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