The detailed information of tRNA gene sequence


Sequence ID>A171005788
Genome IDCP010529
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula sp. CBA1115 [CP010529]
Start position on genome 570925
End posion on genome 571000
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position
cgagtgcatc
tRNA gene sequence
GGGTTGGTGATCTAGTTCGGTTATGATACCTCCTTCACACGGAGGAAGTCGGCGGTTCGA
ATCCGCCCCAACCCACtt
Downstream region at tRNA end position
gccttcttga
Secondary structure (Cloverleaf model)
>A171005788	Val	CAC
                   c      ACtt gccttcttga
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     G - C          T A
                    T     C C G C C     A
    T T G A        G      | | | | |     G
  C         T C T A       G G C G G     C
  G           | | |                 T T
  G         T G A T
    T T A          A     AAGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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