The detailed information of tRNA gene sequence


Sequence ID>A171005872
Genome IDCP010835
Search identical group
Phylum/ClassEuryarchaeota
SpeciesPyrococcus kukulkanii NCB100 [CP010835]
Start position on genome 1110790
End posion on genome 1110867
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
ttctggacgt
tRNA gene sequence 
GCGGTGGTAGTCTAGCCTGGTCTAGGACGCCGGCCTCCCAAGCCGGCGACCCGGGTTCAA
ATCCCGGCCACCGCACCA
Downstream region at tRNA end position 
taaccatttc
Secondary structure (Cloverleaf model)
>A171005872	Gly	CCC
                   t      ACCA taaccatttc
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    T C T A        G     CGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.-

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