The detailed information of tRNA gene sequence


Sequence ID>A171006410
Genome IDCP012986
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNanohaloarchaea archaeon SG9 [CP012986]
Start position on genome 819386
End posion on genome 819297
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acaaggccta
tRNA gene sequence 
GCCGGCGTGGCAGAGTCTGGCTGATTGCGGCAGATTCGAGATCTGCTGGGACATACCCGT
CCCTCCTCGGTTCAAATCCGAGCGCCGGCGaac
Downstream region at tRNA end position 
catccgtact
Secondary structure (Cloverleaf model)
>A171006410	Ser	CGA
                   a      Gaac catccgtact
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     G A G C C     A
    C T G A        G      | | | | |     A
  T         G A C G       C T C G G     C
  G         + | | |                 T T
  G         T T G C
    C T G A        G     TGGGACATACCCGTCCCTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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