The detailed information of tRNA gene sequence


Sequence ID>A171006414
Genome IDCP012986
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNanohaloarchaea archaeon SG9 [CP012986]
Start position on genome 320685
End posion on genome 320611
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcatacctaa
tRNA gene sequence 
AGCGGGGTGGAGCAGCCAGGAGTGCTCGTCGGGCTCATAACCCGGAGGTCCGTGGTTCAA
ATCCACGCCCCGCTAtca
Downstream region at tRNA end position 
tcaaatctgt
Secondary structure (Cloverleaf model)
>A171006414	Met	CAT
                   a      Atca tcaaatctgt
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G C A C C     A
    C C G A        G      | | | | |     A
  A         C G A G       C G T G G     C
  G         | | | |                 T T
  G         G C T C
    A G T          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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