The detailed information of tRNA gene sequence


Sequence ID>A171006415
Genome IDCP012986
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNanohaloarchaea archaeon SG9 [CP012986]
Start position on genome 84144
End posion on genome 84060
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attcatgcta
tRNA gene sequence 
GTCGGGGTCGCATAGTCTGGTATTGCGGTAGCTTGCTAAGCTACTGGGCGCGAGCCCACG
CGGGTTCAAATCCCGCCCCCGACGCtc
Downstream region at tRNA end position 
aaactttaat
Secondary structure (Cloverleaf model)
>A171006415	Ser	GCT
                   a      GCtc aaactttaat
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        C      | | | | |     A
    C       T A C G       G C G G G     C
    T         | | |                 T T
    G       T T G C
      G T A        G     TGGGCGCGAGCCCAC
                    G - C
                    T - A
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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