The detailed information of tRNA gene sequence


Sequence ID>A171006475
Genome IDCP013050
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus barophilus CH5 [CP013050]
Start position on genome 2252801
End posion on genome 2252888
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gcttgtgggt
tRNA gene sequence 
GCGGGGGTTGCCGAGCCTGGTCAAAGGCGGTGGACTCAAGATCCACTCCCGTAGGGGTTC
CGGGGTTCAAATCCCCGCCCCCGCACCA
Downstream region at tRNA end position 
gaaacttttc
Secondary structure (Cloverleaf model)
>A171006475	Leu	CAA
                   t      ACCA gaaacttttc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G C C C C     A
    C C G A        T      | | | | |     A
  T         G C C G       C G G G G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCCCGTAGGGGTTC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.-

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