The detailed information of tRNA gene sequence


Sequence ID>A171006535
Genome IDCP014214
Search identical group
Phylum/ClassUnclassified
Speciesmethanogenic archaeon ISO4-H5 [CP014214]
Start position on genome 120510
End posion on genome 120425
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgatggataa
tRNA gene sequence 
GCCGAGATGGCCCAGCCCGGTAAGGCGGCGGTCTCGAAAACCGCTGGTCTCTGACCTCGG
GAGTTCGAATCTCTCTCTCGGCGCCA
Downstream region at tRNA end position 
tttcatcttc
Secondary structure (Cloverleaf model)
>A171006535	Ser	CGA
                   a      GCCA tttcatcttc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C T C     A
      C G A        G      | + | | |     G
    C       C C C G       G G G A G     C
    C         | | |                 T T
    G       A G G C
      G T A        G     TGGTCTCTGACCTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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