The detailed information of tRNA gene sequence


Sequence ID>A171006689
Genome IDCP016070
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HTSR1 [CP016070]
Start position on genome 749536
End posion on genome 749609
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ccgattttcg
tRNA gene sequence 
GGGCGCGTGGCCAAGAGGATACGGCGAGAGGTTCCTAACCTCTAGATCGCGGGTTCGAAT
CCCGTCGCGCCCGCtc
Downstream region at tRNA end position 
cggtttcttc
Secondary structure (Cloverleaf model)
>A171006689	Arg	CCT
                   g      GCtc cggtttcttc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      A G A        G      + | | | |     G
    G       A C C G       G C G G G     C
    G         | | |                 T T
    A       C G G C
      T A          G     AGATC
                    A - T
                    G - C
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.-

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