The detailed information of tRNA gene sequence


Sequence ID>A171006700
Genome IDCP016070
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HTSR1 [CP016070]
Start position on genome 1756978
End posion on genome 1757052
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ggggttgtca
tRNA gene sequence 
GGGCCAGTAGCTCAATTAGGTAGAGCGCCACTCTGATAAGGTGGAGGCTTGCGGTTCAAA
TCCGCACTGGCCCACtt
Downstream region at tRNA end position 
ctgaacgact
Secondary structure (Cloverleaf model)
>A171006700	Ile	GAT
                   a      ACtt ctgaacgact
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     A C G C C     A
      T A A        A      | | | | |     A
    T       C T C G       T G C G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     AGGCT
                    C - G
                    C - G
                    A - T
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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